Prior Knowledge-enhanced Spatio-temporal Epidemic Forecasting

📅 2026-02-25
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🤖 AI Summary
Existing spatiotemporal epidemic forecasting methods suffer from insufficient sensitivity to weak signals, oversimplified modeling of spatial relationships, and unstable parameter estimation. To address these limitations, this work proposes the STOEP framework, which integrates implicit spatiotemporal priors with explicit expert knowledge through three core components: context-aware adjacency learning, spatially informed parameter estimation, and filter-based prediction. This approach dynamically models regional dependencies, enhances weak epidemiological signals, and regularizes model parameters. Evaluated on real-world COVID-19 and influenza datasets, STOEP achieves an 11.1% reduction in RMSE compared to the best-performing baseline and has been deployed in a provincial Center for Disease Control and Prevention in China.

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📝 Abstract
Spatio-temporal epidemic forecasting is critical for public health management, yet existing methods often struggle with insensitivity to weak epidemic signals, over-simplified spatial relations, and unstable parameter estimation. To address these challenges, we propose the Spatio-Temporal priOr-aware Epidemic Predictor (STOEP), a novel hybrid framework that integrates implicit spatio-temporal priors and explicit expert priors. STOEP consists of three key components: (1) Case-aware Adjacency Learning (CAL), which dynamically adjusts mobility-based regional dependencies using historical infection patterns; (2) Space-informed Parameter Estimating (SPE), which employs learnable spatial priors to amplify weak epidemic signals; and (3) Filter-based Mechanistic Forecasting (FMF), which uses an expert-guided adaptive thresholding strategy to regularize epidemic parameters. Extensive experiments on real-world COVID-19 and influenza datasets demonstrate that STOEP outperforms the best baseline by 11.1% in RMSE. The system has been deployed at one provincial CDC in China to facilitate downstream applications.
Problem

Research questions and friction points this paper is trying to address.

spatio-temporal epidemic forecasting
weak epidemic signals
spatial relations
parameter estimation
Innovation

Methods, ideas, or system contributions that make the work stand out.

spatio-temporal forecasting
epidemic modeling
prior knowledge integration
adaptive parameter estimation
dynamic adjacency learning
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