From Voting to Agent Collaboration: Answer-Type-Aware LLM Pipelines for BioASQ 14b

πŸ“… 2026-07-07
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πŸ€– AI Summary
This work proposes a question-type-aware reasoning framework for large language models (LLMs) tailored to the distinct inferential demands of biomedical question answering, specifically addressing yes/no, factoid, and list-type questions. The approach integrates chain-of-thought prompting, in-context learning, and a self-reflection mechanism, while introducing a multi-agent collaborative reasoning pipeline for list questions that enhances answer robustness and traceability through passage re-ranking and ensemble prediction. Evaluated on Task B of BioASQ 14b, the system achieved top performance on the factoid subtask in Batch 4 and demonstrated competitive overall results.
πŸ“ Abstract
Biomedical question answering requires not only accurate extraction of information from scientific literature but also reliable integration of evidence across multiple documents. This study presents a question-type-specific large language model (LLM) framework for BioASQ 14b Task B, designed to improve answer robustness and evidence grounding in biomedical question answering. Rather than applying a single prompting strategy to all questions, the framework selects different inference procedures for yes/no, factoid, and list questions according to their distinct reasoning and evaluation requirements. For yes/no questions, snippet shuffling and self-reflection are used to reduce sensitivity to evidence ordering and improve decision stability. For factoid questions, full-snippet input is combined with chain-of-thought-based in-context learning to support accurate biomedical entity identification. For list questions, a multi-agent architecture is employed, in which evidence extraction, candidate generation, answer verification, and final aggregation are handled collaboratively. Preliminary experiments on BioASQ 13b were used to identify effective inference strategies for each question type, and the resulting framework was subsequently evaluated in the official BioASQ 14b Task B challenge. In the official evaluation, our framework showed competitive performance across multiple batches and achieved first place in the factoid subtask of Batch 4. These results demonstrate the effectiveness of combining question-type-specific inference, ensemble prediction, and agent-based verification for reliable biomedical question answering.
Problem

Research questions and friction points this paper is trying to address.

biomedical question answering
question-type-specific
evidence integration
answer robustness
BioASQ
Innovation

Methods, ideas, or system contributions that make the work stand out.

question-type-specific LLM
multi-agent collaboration
chain-of-thought reasoning
evidence grounding
self-reflection
T
Taeyun Roh
Department of Computer Science and Engineering, Korea University, Seoul, 02841, Republic of Korea
Eunha Lee
Eunha Lee
SAIT (Samsung Advanced Institute of Technology), Samsung Electronics
Microscopy & spectroscopyelectron tomography2D materialhigh-k dielectricoxide TFT
W
Wonjune Jang
Department of Mathematics, Myongji University, Yongin, 17058, Republic of Korea
S
Sohyun Chung
Department of Computer Science and Engineering, Korea University, Seoul, 02841, Republic of Korea
J
Junha Jung
Department of Computer Science and Engineering, Korea University, Seoul, 02841, Republic of Korea
J
Jaewoo Kang
Department of Computer Science and Engineering, Korea University, Seoul, 02841, Republic of Korea; AIGEN Sciences, Seoul, 04778, Republic of Korea