Cedric Chauve
Scholar

Cedric Chauve

Google Scholar ID: KoTcLskAAAAJ
Professor of Mathematics, Simon Fraser University
Computational BiologyAlgorithms Design and AnalysisDiscrete Mathematics
Citations & Impact
All-time
Citations
1,470
 
H-index
17
 
i10-index
34
 
Publications
20
 
Co-authors
77
list available
Contact
No contact links provided.
Publications
20 items
Browse publications on Google Scholar (top-right) ↗
Resume (English only)
Academic Achievements
  • October 2025: Our paper 'On the size of the neighborhoods of a word' has been accepted for publication in IEEE Transactions on Computational Biology and Bioinformatics.
  • August 2025: Our preprint 'Accurate hybrid plasmids assembly with HyPlAs' is available on biorXiv.
  • August 2025: Cedric gives a talk on ancestral gene orders at the workshop 'Novel Mathematical Paradigm for Phylogenomics'.
  • March 2025: Congratulations to Fatih Karaoglanoglu who successfully defended his PhD.
  • February 2025: Our paper 'A vector representation for phylogenetic trees' has appeared in Philosophical Transactions of the Royal Society B.
  • December 2024: Congratulations to Piyush Agarwal for defending his MSc thesis 'Inference of the effective population size from genomic variation data using a divide & conquer strategy'.
  • November 2024: Our paper 'PlasEval: a framework for comparing and evaluating plasmid detection tools' has appeared in BMC Bioinformatics.
Research Experience
  • Currently a professor in the Department of Mathematics at Simon Fraser University, leading the 'Computational Methods for Paleogenomics and Comparative Genomics' research group.
Background
  • Research interests include computational biology, comparative genomics, and cancer genomics. Focused on phylogenomics (construction and analysis of gene families and gene trees), genome rearrangements and the reconstruction of ancestral gene orders, pathogen genomics, and cancer genomics.
Miscellany
  • Team members include Luca Parmigiani, Leoard Bohnenkämper, Aniket Mane, Fatih Karaoglanoglu, Victor Epain, Pegah Aryadoost, Piyush Agarwal, Andeas Rempel, etc.