Bayesian Uncertainty-Aware MRI Reconstruction

📅 2026-03-13
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🤖 AI Summary
This work addresses the problem of magnetic resonance image reconstruction and uncertainty quantification from undersampled k-space data by formulating reconstruction as a Bayesian linear inverse problem. A total variation prior is introduced to capture the sparsity of image gradients, and an efficient split-augmented Gibbs sampler is designed for posterior inference. The proposed method achieves, for the first time in MRI reconstruction, simultaneous high-fidelity imaging and pixel-wise uncertainty estimation, with the quantified uncertainties showing strong correlation with actual reconstruction errors. Experiments on both single-coil and multi-coil datasets demonstrate that the approach outperforms conventional compressed sensing algorithms in reconstruction quality while providing reliable and interpretable uncertainty measures.

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📝 Abstract
We propose a novel framework for joint magnetic resonance image reconstruction and uncertainty quantification using under-sampled k-space measurements. The problem is formulated as a Bayesian linear inverse problem, where prior distributions are assigned to the unknown model parameters. Specifically, we assume the target image is sparse in its spatial gradient and impose a total variation prior model. A Markov chain Monte Carlo (MCMC) method, based on a split-and-augmented Gibbs sampler, is then used to sample from the resulting joint posterior distribution of the unknown parameters. Experiments conducted using single- and multi-coil datasets demonstrate the superior performance of the proposed framework over optimisation-based compressed sensing algorithms. Additionally, our framework effectively quantifies uncertainty, showing strong correlation with error maps computed from reconstructed and ground-truth images.
Problem

Research questions and friction points this paper is trying to address.

MRI reconstruction
uncertainty quantification
Bayesian inference
under-sampled k-space
inverse problem
Innovation

Methods, ideas, or system contributions that make the work stand out.

Bayesian MRI reconstruction
uncertainty quantification
total variation prior
Markov chain Monte Carlo
compressed sensing
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A
Ahmed Karam Eldaly
Department of Computer Science, University of Exeter, UK
M
Matteo Figini
UCL Hawkes Institute, Department of Computer Science, University College London, UK
Daniel C. Alexander
Daniel C. Alexander
Professor of Imaging Science, Centre for Medical Image Computing, Department of Computer Science
Computer scienceMachine learningMedical imagingdiffusion MRINeuroscience