Bayesian hierarchical bootstrap framework for causal subgroup estimation with a time-to-event outcome

πŸ“… 2026-08-01
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This study addresses the challenges of estimating causal treatment effects within predefined subgroups, where sparse samples, unstable covariate distributions, and right censoring often lead to high bias and uncertainty. The authors propose a novel approach that extends hierarchical Bayesian bootstrap (HBB) to time-to-event causal subgroup analysis with right-censored data. By integrating a Bayesian accelerated failure time model with a nonparametric hierarchical prior, the method models subgroup-specific baseline covariate distributions while borrowing strength across subgroups. Joint uncertainty from both the survival model and covariate distribution is propagated via the posterior g-formula. Simulation studies demonstrate that the proposed method substantially improves estimation stability and accuracy across varying levels of sparsity and censoring, outperforming existing alternatives such as Bayesian additive regression trees.
πŸ“ Abstract
Causal estimation of treatment effects within prespecified subgroups, such as biomarker-defined strata, disease phenotypes, or demographic groups are often of clinical interest. Bayesian approaches are attractive for subgroup effect estimation because flexible priors can represent complex treatment heterogeneity and propagate posterior uncertainty. Frequentist methods for prespecified causal subgroup analysis with time-to-event outcomes are also available, including propensity-score weighting approaches that emphasize subgroup-level covariate balance. In the posterior g-formula, subgroup survival estimands also depend on the subgroup-specific distribution of baseline covariates, which may be unstable when some subgroups are small or unevenly represented. Right censoring separately reduces information for the outcome-model component of the estimand, increasing overall uncertainty in subgroup causal survival contrasts. We extend the hierarchical Bayesian bootstrap (HBB) to subgroup causal inference with right-censored time-to-event outcomes. The HBB places a nonparametric hierarchical prior on subgroup-specific baseline covariate distributions, enabling principled borrowing of information across related subgroups while preserving subgroup-specific structure. We combine this distributional regularization with a Bayesian accelerated failure time model and right censoring to perform a posterior g-formula that propagates uncertainty from both the survival model and the subgroup covariate distribution. The resulting framework stabilizes subgroup causal survival estimands in sparse strata without imposing parametric assumptions on the covariate distribution. Simulation studies examine performance across varying degrees of subgroup sparsity and censoring and compare the proposed approach to the popular Bayesian additive regression tree for heterogeneous survival effects.
Problem

Research questions and friction points this paper is trying to address.

causal subgroup estimation
time-to-event outcome
right censoring
subgroup sparsity
baseline covariate distribution
Innovation

Methods, ideas, or system contributions that make the work stand out.

Hierarchical Bayesian Bootstrap
causal subgroup analysis
time-to-event outcome
posterior g-formula
nonparametric prior
M
Mengyao Shi
Dalla Lana School of Public Health, University of Toronto, Ontario, Canada.
A
Amanda Ricciuto
Division of Gastroenterology, Hepatology Nutrition, The Hospital for Sick Children, Ontario, Canada.
M
Mark Deneau
University of Utah and Intermountain Healthcare Primary Children’s Hospital, Utah, United States.
K
Kuan Liu
Institute of Health Policy, Management and Evaluation, University of Toronto, Ontario, Canada.