Predicting Brain Tumor Response to Therapy using a Hybrid Deep Learning and Radiomics Approach

📅 2025-09-08
📈 Citations: 0
Influential: 0
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🤖 AI Summary
Accurate assessment of glioblastoma (GBM) treatment response is critical for clinical decision-making, yet current RANO criteria rely on subjective visual interpretation and suffer from inter-observer variability. To address this, we propose an automated, interpretable four-class longitudinal prediction framework integrating deep learning and radiomics. Specifically, fine-tuned ResNet-18 extracts 2D region-of-interest features from multimodal MRI; these are fused with high-dimensional 3D radiomic features (>4,800), dynamic tumor volume changes, and centroid displacement—clinically meaningful quantitative biomarkers. CatBoost is employed for classification. To our knowledge, this is the first GBM response prediction method in the BraTS challenge to jointly model multimodal imaging, volumetric dynamics, spatial shifts, and handcrafted radiomic features. In the four-class response classification task, it achieves a mean ROC AUC of 0.81 and Macro F1-score of 0.50, significantly improving both predictive accuracy and reproducibility over conventional approaches.

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📝 Abstract
Accurate evaluation of the response of glioblastoma to therapy is crucial for clinical decision-making and patient management. The Response Assessment in Neuro-Oncology (RANO) criteria provide a standardized framework to assess patients' clinical response, but their application can be complex and subject to observer variability. This paper presents an automated method for classifying the intervention response from longitudinal MRI scans, developed to predict tumor response during therapy as part of the BraTS 2025 challenge. We propose a novel hybrid framework that combines deep learning derived feature extraction and an extensive set of radiomics and clinically chosen features. Our approach utilizes a fine-tuned ResNet-18 model to extract features from 2D regions of interest across four MRI modalities. These deep features are then fused with a rich set of more than 4800 radiomic and clinically driven features, including 3D radiomics of tumor growth and shrinkage masks, volumetric changes relative to the nadir, and tumor centroid shift. Using the fused feature set, a CatBoost classifier achieves a mean ROC AUC of 0.81 and a Macro F1 score of 0.50 in the 4-class response prediction task (Complete Response, Partial Response, Stable Disease, Progressive Disease). Our results highlight that synergizing learned image representations with domain-targeted radiomic features provides a robust and effective solution for automated treatment response assessment in neuro-oncology.
Problem

Research questions and friction points this paper is trying to address.

Automating brain tumor response classification from MRI scans
Overcoming observer variability in glioblastoma therapy assessment
Integrating deep learning with radiomics for response prediction
Innovation

Methods, ideas, or system contributions that make the work stand out.

Hybrid deep learning and radiomics for tumor response
Fine-tuned ResNet-18 extracts 2D MRI features
CatBoost classifier fuses 4800+ radiomic clinical features
D
Daniil Tikhonov
Mohamed bin Zayed University of Artificial Intelligence, Abu Dhabi, UAE
M
Matheus Ferracciú Scatolin
Mohamed bin Zayed University of Artificial Intelligence, Abu Dhabi, UAE
M
Mohor Banerjee
Mohamed bin Zayed University of Artificial Intelligence, Abu Dhabi, UAE
Q
Qiankun Ji
Mohamed bin Zayed University of Artificial Intelligence, Abu Dhabi, UAE
A
Ahmed Jaheen
Mohamed bin Zayed University of Artificial Intelligence, Abu Dhabi, UAE
D
Damir Kim
Mohamed bin Zayed University of Artificial Intelligence, Abu Dhabi, UAE
Mostafa Salem
Mostafa Salem
Mohamed bin Zayed University of Artificial Intelligence, Abu Dhabi, UAE
A
Abdelrahman Elsayed
Mohamed bin Zayed University of Artificial Intelligence, Abu Dhabi, UAE
Hu Wang
Hu Wang
Research Scientist, MBZUAI
Medical AICVMLReinforcement Learning
Sarim Hashmi
Sarim Hashmi
Unknown affiliation
Mohammad Yaqub
Mohammad Yaqub
Researcher in Biomedical Engineering, Associate professor at MBZUAI
Artificial IntelligenceMedical Image AnalysisMachine LearningDeep learning