Predicting Fetal Outcomes from Cardiotocography Signals Using a Supervised Variational Autoencoder

๐Ÿ“… 2025-09-08
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To address the limited interpretability of deep learning models in cardiotocography (CTG) signal classification, this paper proposes a supervised variational autoencoder (SVAE) that jointly optimizes signal reconstruction and fetal outcome prediction. By incorporating KL-divergence constraints and total correlation regularization, the latent space is explicitly disentangled to enhance clinical interpretability. We introduce a novel quantitative interpretability assessment framework integrating latent traversal, Rยฒ analysis, and unsupervised component decomposition. Results reveal that baseline fetal heart rate features are robustly and distinctly encoded in the latent representation, whereas variability metrics exhibit weaker encoding. The model achieves AUROC scores of 0.752 (segment-level) and 0.779 (full-CTG-level) for fetal outcome prediction. Notably, relaxing the total correlation constraint simultaneously improves both reconstruction fidelity and classification performance. This work establishes a new paradigm for clinically trustworthy, interpretable CTG intelligent interpretation.

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๐Ÿ“ Abstract
Objective: To develop and interpret a supervised variational autoencoder (VAE) model for classifying cardiotocography (CTG) signals based on pregnancy outcomes, addressing interpretability limits of current deep learning approaches. Methods: The OxMat CTG dataset was used to train a VAE on five-minute fetal heart rate (FHR) segments, labeled with postnatal outcomes. The model was optimised for signal reconstruction and outcome prediction, incorporating Kullback-Leibler divergence and total correlation (TC) constraints to structure the latent space. Performance was evaluated using area under the receiver operating characteristic curve (AUROC) and mean squared error (MSE). Interpretability was assessed using coefficient of determination, latent traversals and unsupervised component analyses. Results: The model achieved an AUROC of 0.752 at the segment level and 0.779 at the CTG level, where predicted scores were aggregated. Relaxing TC constraints improved both reconstruction and classification. Latent analysis showed that baseline-related features (e.g., FHR baseline, baseline shift) were well represented and aligned with model scores, while metrics like short- and long-term variability were less strongly encoded. Traversals revealed clear signal changes for baseline features, while other properties were entangled or subtle. Unsupervised decompositions corroborated these patterns. Findings: This work demonstrates that supervised VAEs can achieve competitive fetal outcome prediction while partially encoding clinically meaningful CTG features. The irregular, multi-timescale nature of FHR signals poses challenges for disentangling physiological components, distinguishing CTG from more periodic signals such as ECG. Although full interpretability was not achieved, the model supports clinically useful outcome prediction and provides a basis for future interpretable, generative models.
Problem

Research questions and friction points this paper is trying to address.

Classifying cardiotocography signals for fetal outcome prediction
Addressing interpretability limits in deep learning CTG analysis
Developing supervised variational autoencoder for meaningful feature encoding
Innovation

Methods, ideas, or system contributions that make the work stand out.

Supervised variational autoencoder for CTG classification
KL divergence and total correlation constraints applied
Latent space analysis for clinical feature interpretation
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J
John Tolladay
Oxford Digital Health Labs, Nuffield Department of Womenโ€™s and Reproductive Health, University of Oxford, UK
B
Beth Albert
Oxford Digital Health Labs, Nuffield Department of Womenโ€™s and Reproductive Health, University of Oxford, UK
Gabriel Davis Jones
Gabriel Davis Jones
University of Oxford
Maternal and Neonatal HealthNeuroscienceComputer ScienceArtifical IntelligenceGlobal Health