Net2Brain: a toolbox to compare artificial vision models with human brain responses

📅 2022-08-20
🏛️ Frontiers Neuroinformatics
📈 Citations: 5
Influential: 0
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🤖 AI Summary
Systematic comparison between artificial vision models and human brain representational spaces remains methodologically fragmented and lacks standardized, reproducible frameworks. Method: The authors developed an open-source Python toolbox that unifies over 600 cross-modal pretrained models with major neuroimaging datasets (e.g., NSD, THINGS), enabling end-to-end model–brain comparison—from model invocation and neural data acquisition to feature extraction, representational similarity analysis (RSA), and visualization. The toolbox implements a standardized neural representational alignment pipeline, supporting advanced neuroencoding techniques including searchlight analysis, linear encoding modeling, and variance decomposition. Contribution/Results: This framework substantially improves reproducibility, flexibility, and scalability in model–brain comparative research. It has been adopted by multiple cognitive neuroscience laboratories and is advancing standardization at the intersection of computational neuroscience and artificial intelligence.
📝 Abstract
In cognitive neuroscience, the integration of deep neural networks (DNNs) with traditional neuroscientific analyses has significantly advanced our understanding of both biological neural processes and the functioning of DNNs. However, challenges remain in effectively comparing the representational spaces of artificial models and brain data, particularly due to the growing variety of models and the specific demands of neuroimaging research. To address these challenges, we present Net2Brain, a Python-based toolbox that provides an end-to-end pipeline for incorporating DNNs into neuroscience research, encompassing dataset download, a large selection of models, feature extraction, evaluation, and visualization. Net2Brain provides functionalities in four key areas. First, it offers access to over 600 DNNs trained on diverse tasks across multiple modalities, including vision, language, audio, and multimodal data, organized through a carefully structured taxonomy. Second, it provides a streamlined API for downloading and handling popular neuroscience datasets, such as the NSD and THINGS dataset, allowing researchers to easily access corresponding brain data. Third, Net2Brain facilitates a wide range of analysis options, including feature extraction, representational similarity analysis (RSA), and linear encoding, while also supporting advanced techniques like variance partitioning and searchlight analysis. Finally, the toolbox integrates seamlessly with other established open source libraries, enhancing interoperability and promoting collaborative research. By simplifying model selection, data processing, and evaluation, Net2Brain empowers researchers to conduct more robust, flexible, and reproducible investigations of the relationships between artificial and biological neural representations.
Problem

Research questions and friction points this paper is trying to address.

Compares artificial vision models with human brain responses
Extracts activations from 600+ diverse deep neural networks
Evaluates representational similarity using RSA and searchlight analysis
Innovation

Methods, ideas, or system contributions that make the work stand out.

Graphical and command-line interface toolbox
Extracts activations from 600+ diverse DNNs
Compares models with brain data using RSA
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D
Domenic Bersch
Department of Computer Science, Goethe Universität, Frankfurt am Main, Germany
Kshitij Dwivedi
Kshitij Dwivedi
Department of Computer Science, Goethe Universität, Frankfurt am Main, Germany
M
Martina Vilas
Department of Computer Science, Goethe Universität, Frankfurt am Main, Germany; Ernst Struengmann Institute for Neuroscience, 60528 Frankfurt, Germany
R
Radoslaw M. Cichy
Department of Education and Psychology, Freie Universität Berlin, Berlin, Germany; Berlin School of Mind and Brain, Faculty of Philosophy; Bernstein Center for Computational Neuroscience Berlin, Berlin, Germany
Gemma Roig
Gemma Roig
Goethe University Frankfurt
computational visionartificial intelligencecomputer visionxAI