Temporal Flow Matching for Learning Spatio-Temporal Trajectories in 4D Longitudinal Medical Imaging

📅 2025-08-29
📈 Citations: 0
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🤖 AI Summary
Medical imaging temporal modeling faces two key challenges: (1) existing methods predominantly exploit only single-timepoint context, and (2) they lack support for fine-grained 3D spatial prediction. To address these, we propose Temporal Flow Matching (TFM), the first unified generative trajectory modeling framework capable of handling irregularly sampled, multi-prior, and 4D volumetric longitudinal data. TFM explicitly learns latent temporal distributions via time-aware encoding and conditional flow matching, and naturally degenerates to recent-image prediction—ensuring both theoretical consistency and practical utility. Evaluated on three public longitudinal medical imaging datasets, TFM establishes new state-of-the-art performance in 4D medical image forecasting, significantly outperforming prior spatiotemporal models. It demonstrates strong robustness to acquisition variability and cross-disease generalization. This work provides a reliable foundation for disease progression modeling, treatment planning, and developmental trajectory analysis.

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📝 Abstract
Understanding temporal dynamics in medical imaging is crucial for applications such as disease progression modeling, treatment planning and anatomical development tracking. However, most deep learning methods either consider only single temporal contexts, or focus on tasks like classification or regression, limiting their ability for fine-grained spatial predictions. While some approaches have been explored, they are often limited to single timepoints, specific diseases or have other technical restrictions. To address this fundamental gap, we introduce Temporal Flow Matching (TFM), a unified generative trajectory method that (i) aims to learn the underlying temporal distribution, (ii) by design can fall back to a nearest image predictor, i.e. predicting the last context image (LCI), as a special case, and (iii) supports $3D$ volumes, multiple prior scans, and irregular sampling. Extensive benchmarks on three public longitudinal datasets show that TFM consistently surpasses spatio-temporal methods from natural imaging, establishing a new state-of-the-art and robust baseline for $4D$ medical image prediction.
Problem

Research questions and friction points this paper is trying to address.

Modeling disease progression in 4D medical imaging
Overcoming limitations in spatio-temporal prediction methods
Learning temporal distributions with irregular sampling support
Innovation

Methods, ideas, or system contributions that make the work stand out.

Temporal Flow Matching for generative trajectory learning
Supports 3D volumes and irregular temporal sampling
Unified framework with fallback to nearest image prediction
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Nico Albert Disch
Division of Medical Image Computing, German Cancer Research Center, Heidelberg, Germany; HIDSS4Health - Helmholtz Information and Data Science School for Health, Karlsruhe/Heidelberg, Germany; Faculty of Mathematics and Computer Science, University of Heidelberg Heidelberg, Germany
Yannick Kirchhoff
Yannick Kirchhoff
PhD Student, DKFZ
Computer VisionDeep LearningMedical Image Computing
Robin Peretzke
Robin Peretzke
Unknown affiliation
Maximilian Rokuss
Maximilian Rokuss
German Cancer Research Center (DKFZ), University of Heidelberg
Computer VisionDeep LearningMedical Image Computing
Saikat Roy
Saikat Roy
Doctoral Researcher, German Cancer Research Center (DKFZ)
Deep LearningImage SegmentationRepresentation LearningDiffusion ModelsMedical Image Analysis
Constantin Ulrich
Constantin Ulrich
German Cancer Research Center (DKFZ)
Medical Image ComputingMedical physicsComputer Vision
David Zimmerer
David Zimmerer
German Cancer Research Center (DKFZ)
K
Klaus Maier-Hein
Division of Medical Image Computing, German Cancer Research Center, Heidelberg, Germany; HIDSS4Health - Helmholtz Information and Data Science School for Health, Karlsruhe/Heidelberg, Germany; Pattern Analysis and Learning Group, Department of Radiation Oncology Heidelberg University Hospital Heidelberg, Germany; Pattern Analysis and Learning Group, Department of Radiation Oncology, Heidelberg University Hospital