A Breast Vision Pathology Foundation Model for Real-world Clinical Utility

📅 2026-05-06
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🤖 AI Summary
Existing foundation models in computational pathology demonstrate strong performance in retrospective studies, yet their efficacy in real-world clinical settings—particularly across the entire breast cancer diagnostic and therapeutic workflow—remains inadequately validated. This work proposes BRAVE, the first pathology vision foundation model specifically designed for breast cancer, trained via self-supervised pretraining on 101,638 whole-slide images from 32 international centers and evaluated across 34 tasks spanning preoperative biopsy, intraoperative frozen section, and postoperative resection. BRAVE delivers the first comprehensive, large-scale, multicenter validation bridging retrospective benchmarks to prospective observational studies, human–AI interaction, and prognostic prediction. Prospective trials show BRAVE safely rules out 76.9% of negative biopsies and 70.1% of negative frozen sections (NPV > 0.95), elevates pathologists’ diagnostic accuracy to 95.1%, and significantly predicts both disease-free and overall survival.
📝 Abstract
Pathology foundation models have shown strong retrospective performance, but whether such systems can support clinically relevant use remains unclear. This challenge is particularly important in breast cancer, where pathological assessment serves as the gold standard for diagnosis and guides treatment planning, surgical decision-making and risk stratification across pre-, intra- and post-operative stages. Here we present \textbf{BRAVE}, a breast-adaptive pathology foundation model developed and evaluated using a total resource of 101,638 breast whole-slide images from 32 sources across Asia, Europe and North America. We assessed BRAVE across 34 tasks in 82 cohorts spanning pre-operative biopsy, intra-operative frozen section and post-operative resection, using an evidence chain comprising retrospective benchmarking, clinically challenging scenarios, workflow-oriented clinical impact simulations, prospective observational validation with the thresholds locked in the retrospective cohorts and crossover pathologist-AI interaction studies. Across these settings, BRAVE supported practical roles in the clinical workflow, including safe exclusion of low-risk cases from routine review, AI-assisted second-review rescue of initially missed positives and prioritization of cases for further assessment. In prospective validation across three centres, BRAVE excluded 76.9% of negative biopsy cases (NPV 0.953) and 70.1% of negative frozen-section cases (NPV 0.973), and triaged 78.8% of post-operative subtyping cases as high-confidence clear-cut cases (NPV 1.000). In reader studies, AI assistance improved balanced accuracy from 88.5% to 95.1% (OR 3.14, P<0.001), with better efficiency, confidence and inter-rater agreement. BRAVE-derived scores also independently predicted disease-free survival (adjusted HR 4.79, P<0.001) and overall survival (adjusted HR 8.14, P<0.001).
Problem

Research questions and friction points this paper is trying to address.

pathology foundation model
breast cancer
clinical utility
whole-slide image
real-world validation
Innovation

Methods, ideas, or system contributions that make the work stand out.

foundation model
breast pathology
prospective validation
clinical workflow integration
AI-assisted diagnosis
Yingxue Xu
Yingxue Xu
The Hong Kong University of Science and Technology
Multimodal LearningSurvival AnalysisComputational Pathology
Z
Zhengyu Zhang
Department of Pathology, Nanfang Hospital, School of Basic Medical Sciences, Southern Medical University, Guangzhou, China
X
Xiuming Zhang
Department of Pathology, The First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou, China
M
Mengwei Xu
State Key Laboratory of Holistic Integrative Management of Gastrointestinal Cancers, Department of Pathology, School of Basic Medicine and Xijing Hospital, Fourth Military Medical University, Xi’an, China
Fengtao Zhou
Fengtao Zhou
Hong Kong University of Science and Technology
Multimodal LearningComputational Pathology
Yihui Wang
Yihui Wang
PhD student in CSE, HKUST
Computer VisionMedical Image AnalysisComputational Pathology
J
Jiabo Ma
Department of Computer Science and Engineering, The Hong Kong University of Science and Technology, Hong Kong SAR, China
Yi Xin
Yi Xin
California Institute of Technology
Industrial OrganizationEconometrics
D
Danyi Li
Department of Pathology, Nanfang Hospital, School of Basic Medical Sciences, Southern Medical University, Guangzhou, China
Chengyu Lu
Chengyu Lu
City University of Hong Kong
Evolution strategymultiobjective optimization
Z
Zhijian Cen
Department of Pathology, Nanfang Hospital, School of Basic Medical Sciences, Southern Medical University, Guangzhou, China
Ying Tan
Ying Tan
Shenzhen Maternity and Child Healthcare Hospital, Southern Medical University
Q
Qingbing Yao
School of Information and Electronic Engineering, Shandong Technology and Business University, Yantai, China
Q
Qi Wang
Big Data and Artificial Intelligence Laboratory, Yantai Yuhuangding Hospital, Qingdao University, Yantai, Shandong, China
Z
Zizhao Gao
State Key Laboratory of Holistic Integrative Management of Gastrointestinal Cancers, Department of Pathology, School of Basic Medicine and Xijing Hospital, Fourth Military Medical University, Xi’an, China
Y
Yong Zhang
Department of Pathology, Cancer Hospital of Dalian University of Technology, Cancer Hospital of China Medical University, Liaoning Cancer Hospital & Institute, Shenyang, Liaoning, China
Jingjing Chen
Jingjing Chen
Fudan University
MultimediaComputer VisionMachine LearningPattern recognition
F
Feifei Liu
Department of Ultrasound, Binzhou Medical University Hospital, Yantai, Shandong Province, China
Q
Qian Xu
Department of Computed Tomography and Magnetic Resonance, The Fourth Hospital of Hebei Medical University, Shijiazhuang, Hebei, China
Yi Dai
Yi Dai
Ph.D. Candidate, University of Michigan
process controlmodel predictive control
H
Hongxuan Tan
Department of Anatomical and Cellular Pathology, The Chinese University of Hong Kong, Hong Kong SAR, China
Cheng Jin
Cheng Jin
Ph.D. Student, School of Computer Science and Engineering, HKUST
Knowledge DistillationComputational PathologyAI for Science
Huajun Zhou
Huajun Zhou
The Hong Kong University of Science and Technology
Computer VisionMedical Image Processing
Z
Zhengrui Guo
Department of Computer Science and Engineering, The Hong Kong University of Science and Technology, Hong Kong SAR, China
Ling Liang
Ling Liang
pku.edu.cn