emgforge: an automated end-to-end pipeline for simulating surface EMG on MRI-based volume conductors

2026-09-15

AI Summary

本文介绍了emgforge，一种基于MRI的自动化端到端表面EMG模拟管道，用于解决现有模拟器几何固定或不完整的问题。

Abstract

Simulated electromyograms are used to understand what an electrode records, to test decomposition and estimation algorithms on signals with known ground truth, and to train learning-based decoders. Most simulators fix the geometry to a cylinder or a slab, or stop at the lead field and leave the rest to the user. We present emgforge, an open pipeline that takes a labelled MRI segmentation of a limb to surface EMG in one command: a tetrahedral mesh with conductivity tensors aligned with each muscle's fibres; one reciprocal finite-element solve per electrode, valid for every fibre of every muscle; fibre beds that are straight or follow the muscle's shape; a motor-unit pool obeying the size principle; motor-unit action potentials on any electrode layout; and a motoneuron-pool and twitch layer that turns a drive or a movement into interference EMG and force. We describe the pipeline stage by stage, and at each stage we show, with an example, why the choice was made. The step that turns a lead field into a single-fibre action potential -- direct line-source synthesis -- is checked against a closed-form solution ($r = 1.0000$, zero lag), and the whole chain against fifty checks with numeric criteria from the physiological literature. We then use the pipeline for four studies: what an electrode sees as a function of depth, fat, spacing and montage; whether fibre geometry changes the signal; how much crosstalk a grid over one muscle receives from its neighbours; and how interference EMG scales with drive. The code, the validation suite and three datasets with ground truth are released.

Problem

• surface EMG
• simulation
• MRI-based
• volume conductor
• pipeline

Innovation

• automated end-to-end pipeline
• tetrahedral mesh with conductivity tensors
• reciprocal finite-element solve
• motor-unit pool
• interference EMG