A Voxel-Spacing-Aware Extension of PyRadiomics for Anisotropic Texture Analysis

📅 2026-09-12
📈 Citations: 0
Influential: 0
📄 PDF
🤖 AI Summary
本文针对各向异性CT和MRI图像中相同体素偏移代表不同物理距离的问题,通过扩展PyRadiomics框架加入体素间距信息来解决,无需生成插值灰度级。
📝 Abstract
Radiomic texture features are commonly extracted from anisotropic CT and MRI acquisitions, where identical voxel offsets may represent different physical distances. We implemented and validated a voxel-spacing-aware extension of PyRadiomics that incorporates spacing information without generating interpolated gray levels. The framework operates across the Python frontend, C wrapper, and computational backend. GLCM uses anisotropy-relative feature-level angular aggregation, NGTDM uses anisotropy-relative weighted neighborhood averaging, and GLRLM, GLDM, and GLSZM are computed on a finite-volume zero-order-hold representation derived from the native anisotropic grid. Synthetic 3D phantoms were used for software validation. The modified implementation reproduced standard PyRadiomics exactly when spacing-aware mode was disabled and remained equivalent under isotropic spacing across 75 texture features. Under anisotropic spacing, the method selectively modified texture families and was numerically distinct from nearest-neighbor, linear, and B-spline resampling. Computational profiling showed moderate runtime and memory increases, while sensitivity analyses quantified finite-volume rounding effects and confirmed that spacing-aware differences persisted across binWidth settings. The framework provides a backward-compatible technical basis for future evaluation of spacing-aware radiomics in heterogeneous medical imaging datasets.
Problem

Research questions and friction points this paper is trying to address.

Voxel-Spacing-Aware
Anisotropic Texture Analysis
Radiomic Features
Innovation

Methods, ideas, or system contributions that make the work stand out.

voxel-spacing-aware
anisotropic texture analysis
PyRadiomics extension
🔎 Similar Papers
No similar papers found.
💼 Related Jobs
No related jobs found.
D
David Corral Fontecha
Department of Radiology, Complejo Asistencial Universitario de León, León, Spain
J
Juan Miranda Bautista
Department of Radiology, Hospital Universitario Rey Juan Carlos, Móstoles, Madrid, Spain; Health Research Institute of the Jiménez Díaz Foundation, IIS-FJD, Madrid, Spain; Department of Physical Therapy, Occupational Therapy, Rehabilitation and Physical Medicine, Rey Juan Carlos University, Madrid, Spain; Department of Morphology and Cell Biology, Grupo SINPOS, Universidad de Oviedo, Oviedo, Spain
P
Pablo Menendez Fernández-Miranda
Department of Radiology, Hospital Universitario Rey Juan Carlos, Móstoles, Madrid, Spain; Health Research Institute of the Jiménez Díaz Foundation, IIS-FJD, Madrid, Spain; Department of Physical Therapy, Occupational Therapy, Rehabilitation and Physical Medicine, Rey Juan Carlos University, Madrid, Spain; Department of Morphology and Cell Biology, Grupo SINPOS, Universidad de Oviedo, Oviedo, Spain
A
Andrea Trapote Fernandez
Universidad de Oviedo, Oviedo, Spain
L
Lara Lloret Iglesias
Advanced Computing and e-Science Group, IFCA-CSIC, Santander, Spain
J
Jose A. Vega
Department of Morphology and Cell Biology, Grupo SINPOS, Universidad de Oviedo, Oviedo, Spain; Facultad de Ciencias de la Salud, Universidad Autónoma de Chile, Providencia-Santiago, Chile