Time-Aware Latent Space Bayesian Optimization

📅 2026-03-01
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🤖 AI Summary
This work addresses the performance degradation of latent space Bayesian optimization (LSBO) under time-varying objective functions—such as shifting user preferences or evolving design goals—by proposing Time-Aware Latent Space Bayesian Optimization (TALBO). TALBO is the first method to explicitly model temporal dynamics within the joint learning of the generative and surrogate models, leveraging a Gaussian process prior variational autoencoder (GP-prior VAE) to enable co-evolution of latent representations and the objective function. The authors introduce a benchmark for molecular design with time-varying objectives and demonstrate TALBO’s superiority across diverse multi-objective optimization tasks. The method exhibits robustness under varying drift rates and design choices while maintaining competitive performance in static settings.

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📝 Abstract
Latent-space Bayesian optimization (LSBO) extends Bayesian optimization to structured domains, such as molecular design, by searching in the continuous latent space of a generative model. However, most LSBO methods assume a fixed objective, whereas real design campaigns often face temporal drift (e.g., evolving preferences or shifting targets). Bringing time-varying BO into LSBO is nontrivial: drift can affect not only the surrogate, but also the latent search space geometry induced by the representation. We propose Time-Aware Latent-space Bayesian Optimization (TALBO), which incorporates time in both the surrogate and the learned generative representation via a GP-prior variational autoencoder, yielding a latent space aligned as objectives evolve. To evaluate timevarying LSBO systematically, we adapt widely used molecular design tasks to drifting multi-property objectives and introduce metrics tailored to changing targets. Across these benchmarks, TALBO consistently outperforms strong LSBO baselines and remains robust across drift speeds and design choices, while remaining competitive under actually time-invariant objectives.
Problem

Research questions and friction points this paper is trying to address.

time-varying objectives
latent-space Bayesian optimization
temporal drift
molecular design
structured domains
Innovation

Methods, ideas, or system contributions that make the work stand out.

Time-Aware Bayesian Optimization
Latent Space Alignment
Temporal Drift
GP-prior VAE
Molecular Design
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