Exploiting Intermediate Reconstructions in Optical Coherence Tomography for Test-Time Adaption of Medical Image Segmentation

📅 2026-03-05
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🤖 AI Summary
This work addresses the challenge of medical image segmentation under low-quality imaging conditions prevalent in primary care settings. While existing methods rely solely on the final reconstructed image, they overlook the semantically rich intermediate representations generated during the reconstruction process. To bridge this gap, the authors propose IRTTA, a test-time adaptation framework that dynamically modulates the parameters of normalization layers in a frozen segmentation model by leveraging these intermediate features—without altering the reconstruction pipeline or retraining the downstream model. IRTTA is the first method to enable test-time adaptive segmentation based on reconstruction intermediates and introduces an average entropy loss to refine uncertainty estimation. Experiments demonstrate that IRTTA significantly improves segmentation accuracy while providing semantically consistent and reliable uncertainty quantification, all without additional computational overhead.

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📝 Abstract
Primary health care frequently relies on low-cost imaging devices, which are commonly used for screening purposes. To ensure accurate diagnosis, these systems depend on advanced reconstruction algorithms designed to approximate the performance of high-quality counterparts. Such algorithms typically employ iterative reconstruction methods that incorporate domain-specific prior knowledge. However, downstream task performance is generally assessed using only the final reconstructed image, thereby disregarding the informative intermediate representations generated throughout the reconstruction process. In this work, we propose IRTTA to exploit these intermediate representations at test-time by adapting the normalization-layer parameters of a frozen downstream network via a modulator network that conditions on the current reconstruction timescale. The modulator network is learned during test-time using an averaged entropy loss across all individual timesteps. Variation among the timestep-wise segmentations additionally provides uncertainty estimates at no extra cost. This approach enhances segmentation performance and enables semantically meaningful uncertainty estimation, all without modifying either the reconstruction process or the downstream model.
Problem

Research questions and friction points this paper is trying to address.

Optical Coherence Tomography
Medical Image Segmentation
Intermediate Reconstructions
Test-Time Adaptation
Uncertainty Estimation
Innovation

Methods, ideas, or system contributions that make the work stand out.

test-time adaptation
intermediate reconstructions
optical coherence tomography
uncertainty estimation
modulator network
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Medical University of Vienna
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Veit Hucke
Institute of Artificial Intelligence, Center for Medical Data Science, Medical University of Vienna, Austria
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Hrvoje Bogunovic
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