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Regenstrief Institute

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Representative Papers

An Agentic Generative Large Language Model for Treatment Planning of Colorectal Cancer

Aug 10, 2026

This study addresses the challenges of heterogeneous data integration, dynamic adherence to clinical guidelines, and safe decision-making in precision treatment for colorectal cancer by proposing GatorOnco—the first large language model that integrates agent-based reasoning with large-scale domain adaptation. The approach leverages domain-adaptive pretraining, model fusion, two-stage post-training, agent-based reinforcement learning, and retrieval-augmented generation (RAG) to enable dynamic incorporation of clinical guidelines and generate safe, controllable treatment plans. In blinded evaluations, GatorOnco significantly outperformed existing open-source large language models (P<0.01), surpassing human experts in readability and completeness while matching oncologists in correctness, timeliness, and safety.

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Latest Papers

An Agentic Generative Large Language Model for Treatment Planning of Colorectal Cancer

Aug 10, 2026

This study addresses the challenges of heterogeneous data integration, dynamic adherence to clinical guidelines, and safe decision-making in precision treatment for colorectal cancer by proposing GatorOnco—the first large language model that integrates agent-based reasoning with large-scale domain adaptation. The approach leverages domain-adaptive pretraining, model fusion, two-stage post-training, agent-based reinforcement learning, and retrieval-augmented generation (RAG) to enable dynamic incorporation of clinical guidelines and generate safe, controllable treatment plans. In blinded evaluations, GatorOnco significantly outperformed existing open-source large language models (P<0.01), surpassing human experts in readability and completeness while matching oncologists in correctness, timeliness, and safety.

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